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"Penelitian bertujuan mengetahui kemampuan antagonisme khamir filum Ascomycota dari tanaman saeh (Broussonetia papyrifera Vent.) terhadap kapang patogen tomat (Lycopersicon esculentum Mill.) dengan metode co-culture. Khamir Aureobasidium pullulans UICC Y-527, Aureobasidium sp. UICC Y-516, Aureobasidium sp. UICC Y-528, Candida orthopsilosis UICC Y-533, Meyerozyma caribbica UICC Y-518, dan Mey. caribbica UICC Y-529 ditumbuhkan dengan kapang Aspergillus spp. UICC di medium Potato Dextrose Broth (PDB) selama empat hari pada suhu 28° C. Khamir menunjukkan kemampuan antagonisme terhadap kapang A. niger UICC, A. ochraceus UICC, dan A. terreus UICC yang ditunjukkan dengan ketiadaan pertumbuhan hifa atau miselium dan sporulasi pada permukaan medium, mortalitas kapang sebesar 100%, reduksi ukuran hifa kapang sebesar 3%--85%, peningkatan jumlah sel khamir sebesar 1,81%--50,09%, peningkatan panjang sel khamir sebesar 2%--17% dan lebar sel khamir sebesar 1%--24%.

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The research aim was to investigate the antagonism activity of Ascomycota yeasts from saeh plant (Broussonetia papyrifera Vent.) from Trowulan against moulds pathogen in tomato (Lycopersicon esculentum Mill.) with co-culture method. Aureobasidium pullulans UICC Y-527, Aureobasidium sp. UICC Y-516, Aureobasidium sp. UICC Y-528, Candida orthopsilosis UICC Y-533, Meyerozyma caribbica UICC Y-518, and Mey. caribbica UICC Y-529 were incubated with Aspergillus spp. UICC in Potato Dextrose Broth (PDB) medium for four days in 28° C.

The results showed that the yeasts have antagonism activity against A. niger UICC, A. ochraceus UICC, and A. terreus UICC shown by mycelial growth inhibition and sporulation, 100% mortality, hyphal size reduction 3%--85%, increased number of the yeast cell 1.81%--50.09%, and increased yeast cell length 2%--17% and increased yeast cell width 1%--24%."

"Sektor kelapa sawit (Elaeis guineensis Jacq.) berperan penting dalam perekonomian nasional, tetapi terancam oleh infeksi Ganoderma boninense yang menyebabkan penyakit Busuk Pangkal Batang (BPB). Salah satu upaya pengendalian penyebaran fungi fitopatogen yaitu menggunakan bakteri antagonis. Penelitian ini bertujuan untuk menguji potensi antagonis ko-kultur Bacillus siamensis LDR dan Stenotrophomonas maltophilia G17 terhadap Ganoderma boninense melalui uji antagonis dan antibiosis. Uji antagonis dilakukan menggunakan metode dual culture berupa pour plate dan disc delayed culture pada medium. Filtrat ko-kultur yang difermentasi selama 5 dan 7 hari pada Nutrient Broth (NB) dan NB dengan tambahan glukosa digunakan untuk uji antibiosis menggunakan metode agar well diffusion dan pour plate. Uji antagonis maupun uji antibiosis dilakukan pada medium Plate Count Agar (PCA) dan Potato Dextrose Agar (PDA). Potensi antagonis dan antibiosis ko-kultur bakteri terhadap fungi diukur berdasarkan diameter pertumbuhan fungi yang menunjukkan hambatan menggunakan rumus Growth Inhibition Rate (GIR). Hasil uji antagonis menunjukkan hambatan pertumbuhan fungi mencapai 69.63% ± 2,46% pada metode disc delayed culture sedangkan pada metode pour plate mencapai 100%. Sementara, filtrat hasil fermentasi ko-kultur bakteri berusia 5 hari dan 7 hari menghasilkan senyawa antifungi yang menghambat pertumbuhan fungi uji dengan GIR mencapai 100% pada metode pour plate dan 48,20% ± 2,23% pada metode agar well diffusion. Filtrat hasil fermentasi selama 5 hari menunjukkan performa antibiosis yang lebih baik. Sementara, penambahan glukosa pada proses fermentasi tidak meningkatkan performa antibiosis. Selanjutnya, perlu dilakukan identifikasi senyawa antifungi yang dihasilkan oleh ko-kultur B. siamensis LDR dan S. maltophilia G17.

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The oil palm sector (Elaeis guineensis Jacq.) plays a crucial role in the national economy but is threatened by Ganoderma boninense, causing Basal Stem Rot (BSR). One strategy to control the spread of this phytopathogenic fungus is to employ antagonistic bacteria. This research aims to assess the antagonistic potential of co-cultured Bacillus siamensis LDR and Stenotrophomonas maltophilia G17 against G. boninense through antagonism and antibiosis assays. Antagonism assays were conducted using pour plate and disc delayed culture methods. Fermented co-culture filtrates (5 and 7-day) in Nutrient Broth (NB) and NB supplemented with glucose were utilized for antibiosis assays, using agar well diffusion and pour plate methods. Both assays were conducted on Plate Count Agar (PCA) and Potato Dextrose Agar (PDA) media. Potency of bacterial co-culture against G. boninense were evaluated based on the inhibition diameter of fungal growth, calculated using the Growth Inhibition Rate (GIR) formula. The antagonism assay results showed fungal growth inhibition of 69.63% ± 2.46% with the disc delayed culture, while the pour plate achieved 100% inhibition. Meanwhile, the filtrate from the 5 and 7-day fermented bacterial co-culture produced antifungal compounds that inhibited fungal growth by 100% using the pour plate and 48.20% ± 2.23% using the agar well diffusion. The 5-day fermented filtrate showed better antibiosis performance. The addition of glucose during the fermentation process did not enhance antibiosis performance. Further identification of antifungal compounds produced by the B. siamensis LDR and S. maltophilia G17 co-culture is needed."

"Penelitian dilakukan untuk mengetahui kemampuan antagonisme khamir Filum Ascomycota dari tanaman saeh (Broussonetia papyrifera Vent.) asal Bandung terhadap Aspergillus spp. UICC dari tanaman tomat terinfeksi menggunakan metode co-culture. Seluruh khamir yang diuji (Candida quercitrusa UICC Y-470, Debaryomyces nepalensis UICC Y-456, Pichia burtonii UICC Y-468, Saccharomycetales sp. UICC Y-462, Saccharomycetales sp. UICC Y-471, dan Wickerhamomyces anomalus UICC Y-455) bersifat antagonis terhadap Aspergillus spp. UICC. Saccharomycetales sp. UICC Y-462 merupakan khamir antagonis paling potensial karena memiliki kemampuan menghambat pertumbuhan kapang dan mereduksi lebar hifa kapang A. terreus UICC sebesar 56,90% hingga inkubasi hari ke-3.

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This research investigated the antagonism activity of Phylum Ascomycota yeasts of saeh plant (Broussonetia papyrifera Vent.) from Bandung against Aspergillus spp. UICC from infected tomato plant using co-culture method. All the yeasts (Candida quercitrusa UICC Y-470, Debaryomayces nepalensis UICC Y-456, Pichia burtonii UICC Y-468, Saccharomycetales sp. UICC Y-462, Saccharomycetales sp. UICC Y-471, and Wickerhamomyces anomalus UICC Y-455) are antagonists. Saccharomycetales sp. UICC Y-468 is the most potential antagonistic yeast by inhibiting the growth of hyphae and reducing hyphal length of Aspergillus terreus UICC up to 56.90% at day-3."

"Infark miokard menyebabkan kematian kardiomiosit dan remodeling jantung pada situasi patologis. Pascainfark jantung tidak mampu mengatasi kehilangan kardiomiosit meskipun telah dilakukan rekanalisasi atau revaskularisasi. Oleh karena itu, diperlukan metode untuk mengembalikan fungsi jantung. Sel punca dapat memperbaharui diri dan berdiferensiasi menjadi berbagai tipe sel namun kesintasannya pada pasien masih rendah. Untuk meningkatkan retensi dan regenerasi sel punca di miokardium dapat digunakan perancah/scaffold dan sistem ko-kultur, namun belum ada penelitian tentang hal tersebut. Penelitian ini bertujuan mengembangkan terapi infark menggunakan injeksi hidrogel transepikardial dan implantasi di epikardial perancah patch membran amnion yang dideselularisasi menggunakan amniotic epithelial cells (AEC) dengan ko-kultur kardiomiosit. Penelitian ini menggunakan post-test only control group design yang dilakukan di Institut Pertanian Bogor dan Fakultas Kedokteran Universitas Indonesia dari Juli 2021–Oktober 2022. Subjek penelitian adalah 15 babi Sus scrofa domesticus usia 2-3 bulan dibagi tiga kelompok: pAEC, pAEC + kardiomiosit, kontrol positif, dan 1 babi sebagai kontrol negatif. Torakotomi dilakukan untuk membuat model infark dengan ligasi arteri proximal branch to left ventricle (PLV) dilanjutkan implantasi pAEC dengan atau tanpa ko-kultur kardiomiosit pada kelompok terapi, kemudian diobservasi selama 6–8 minggu. Luas infark diukur dengan late gadolinium enhancement MRI; remodeling ventrikel kiri dengan ekokardiografi untuk menilai kontraktilitas, fibrosis dengan IHK, kardiomiogenesis dan regulasi apoptosis dengan RT-PCR, angiogenesis dinilai dengan IHK, dan fraksi ejeksi dinilai dengan ekokardiografi. Luas infark menurun pada kedua kelompok terapi (2,5 [2,00–3,00]% dan 3,60 ± 1,34% vs 9,50 ± 1,91%). Pewarnaan HE dan Masson trichrome menunjukkan berkurangnya proses fibrosis pada kedua kelompok, dikonfirmasi dengan hiperekspresi kolagen1 yang padat dan kaku pada kontrol positif dibandingkan kedua kelompok terapi yang memiliki ekspresi kolagen3 lebih dominan. Ekspresi α-smooth muscle actin pada kedua kelompok tampak tersebar menunjukkan penurunan fibrosis dan kontrol positif menunjukkan peningkatan fibrosis. Peningkatan kardiomiogenesis pada kedua kelompok dikonfirmasi dengan peningkatan ekspresi gen cardiac troponin T, gen myosin heavy chain, gen Nkx.2.5, gen c-Kit, dan penanda otot fungsional α-actinin. Penurunan apoptosis dikonfirmasi dengan penurunan ekspresi gen modulator apoptosis p21 dan ekspresi gen p53 yang berarti diferensiasi sel punca tidak bersifat tumorigenik. Regulasi apoptosis melalui ekspresi kaspase-9 tidak berbeda bermakna. Peningkatan angiogenesis dikonfirmasi dengan peningkatan ekspresi von Willebrand Factor dan ekspresi α-smooth muscle actin yang tersebar. Ekokardiografi menunjukkan perbaikan regional wall motion abnormality lebih banyak pada kelompok terapi daripada kontrol positif dan fraksi ejeksi tidak berbeda bermakna antar kelompok. Disimpulkan kombinasi injeksi hidrogel transepikardial dan implantasi di epikardial perancah patch membran amnion yang dideselularisasi dengan ko-kultur AEC dan kardiomiosit dapat mengurangi luas infark dan remodelling ventrikel kiri, serta meningkatkan angiogenesis pada babi model infark.

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Myocardial infarction induces cardiomyocyte death and remodelling a pathological condition. The post-infarct heart is unable to deal with cardiomyocyte loss despite recanalization or revascularization. Therefore, a procedure is required to restore cardiac function. Stem cells can self-renew and specialize into multiple cell types however the survival of stem cells in patients is still poor. To promote the retention and regeneration of stem cells in the myocardium, scaffolds and co-culture systems may be applicated, although there are no study findings on this issue. This study aimed to develop myocardial infarction therapy using transepicardial hydrogel injection and epicardial decellularized amniotic membrane scaffold patch implantation using amniotic epithelial cells (AEC) with cardiomyocyte co-culture. This study used a post-test-only control group design performed at the IPB University and the Faculty of Medicine, Universitas Indonesia, from July 2021 to October 2022. The study subjects were 15 Sus scrofa domesticus pigs aged 2-3 months placed into three groups: pAEC, pAEC + cardiomyocytes, positive control, and 1 pig as a negative control. Thoracotomy was conducted to create an infarct model with the proximal branch to left ventricle (PLV) artery occlusion followed by pAEC implantation with or without cardiomyocyte co-culture in the therapy group, then evaluated for 6–8 weeks. Infarct size was determined by late gadolinium enhancement MRI, left ventricular remodeling by echocardiography to evaluate contractility, fibrosis by IHC, cardiomyogenesis and regulation of apoptosis by RT-PCR, angiogenesis was assessed by IHC, and ejection fraction by echocardiography. Infarct size reduced in both therapy groups (2,5 [2,00–3,00]% and 3,60 ± 1,34% vs 9,50 ± 1,91%). HE and Masson trichrome staining demonstrated decreased fibrosis in both groups, confirmed by hyperexpression of dense and stiff collagen 1 in the positive control compared to the two therapy groups with more dominant collagen 3 expressions. The α-smooth muscle actin expression in both groups seemed to be scattered suggesting reduced fibrosis while the positive control showed increased fibrosis. Increased cardiomyogenesis in both groups was confirmed by increased expression of the cardiac troponin T gene, the myosin heavy chain gene, the Nkx.2.5 gene, the c-Kit gene, and the functional muscle marker α-actinin. The reduction in apoptosis has been confirmed by lower expression of the p21 apoptosis modulator gene and p53 gene expression, which suggests that stem cell differentiation is not tumorigenic. The control of apoptosis by caspase-9 expression was not significantly different. Increased angiogenesis was verified by increased von Willebrand Factor expression and scattered expression of α-smooth muscle actin. Echocardiography showed greater improvement in regional wall motion abnormalities in the therapy groups than in the positive control, and the ejection fraction was not significantly different between groups. It was concluded that the combination of transepicardial hydrogel injection and epicardial decellularized amniotic membrane scaffold patch implantation using AEC with cardiomyocyte co-culture could reduce infarct size and left ventricular remodeling, as well as increase angiogenesis in infarct model pigs."

"Kanker ovarium adalah salah satu jenis kanker dengan angka kematian tinggi bila dibandingkan dengan kanker organ reproduksi wanita lainnya. Imunoterapi menggunakan sel natural killer (NK) merupakan alternatif pengobatan terapi kanker ovarium. Akan tetapi keberhasilan penggunaan sel NK terbatas pada kanker hematologis dikarenakan lingkungan mikro tumor kanker ovarium melemahkan kinerja sel NK. Halyang dapat dilakukan adalah menginduksi sel NK kanker ovarium dengan lisat hasil ultrasentrifugasi jaringan ovarium. Penelitian ini bertujuan menganalisis pengaruhinduksi lisat hasil ultrasentrifugasi jaringan ovarium terhadap sitotoksisitas sel NK kanker ovarium terhadap sel kanker ovarium manusia (SKOV-3) serta marka fenotipe (CD56+CD3-), reseptor aktivasi (NKp46, NKp30, NKp44, dan NKG2D), dan inhibisi (NKG2A dan KIR2D) sel NK. Sel NK diisolasi dari sampel darah perifer enam pasien kanker ovarium kemudian sel NK diinduksi oleh lisat hasil ultrasentrifugasi jaringan ovarium selama 24 jam. Sel NK yang telah diinduksi kemudian dikokultur dengan SKOV-3 selama 24 jam dan dianalis dengan flow cytometry. Hasil flow cytometry sel NK yang diinduksi dengan pelet menunjukkan kenaikan pada ekspresi marka fenotipe CD56, reseptor aktivasi NKp46, NKp30, NKG2D, dan reseptor inhibisi KIR2D dan penurunan pada ekspresi marka fenotipe CD3, reseptor aktivasi NKp44, dan reseptor inhibisi NKG2A dibandingkan dengan sel NK tanpa induksi dan yang diinduksi IL-2. Hasil analisis flow cytometry uji sitotoksisitas sel NK yang diinduksi dengan pelet menunjukkan peningkatan kematian SKOV-3 hingga 45,3% dari 4,82% di sel NK tanpa induksi. Hal tersebut menunjukkan bahwa induksi lisat hasil ultrasentrifugasi jaringan ovarium memengaruhi ekspresi marka fenotipe, reseptor aktivasi, reseptor inhibisi pada sel NK, juga meningkatkan kemampuan sitotoksisitas sel NK.

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Ovarian cancer is considered to have a high death rate on women among other types of gynecologic cancer. Imunotherapy using natural killer (NK) cells can be used to treat ovarian cancer. However, positive results on NK cells usage on hematologic cancer are limited due to the microtumor environment weakened the function of NK cells. The solution to this problem is to induce cancer ovarium NK cells with ultracentrifuged ovarian tissue lysate. This study was conducted to analyze the effect of ultracentrifuged ovarian tissue lysate induction towards human ovarian cancer NK cells’ cytotoxicity on human cancer cell line, SKOV-3 also its phenotype marker (CD56+CD3-), activating receptors (NKp46, NKp30, NKp44 dan NKG2D), and inhibitory receptors (NKG2A dan KIR2D). NK cells were isolated from six ovarian cancer patients’ peripheral blood then inducted with ultracentrifuged ovarian tissue lysate for 24 hours. Inducted NK cells then

cocultured with SKOV-3 for another 24 hours then analyzed with flow cytometry. Flow cytometry’s result showed that ultracentrifuged ovarian tissue lysate induction increases

NK cell phenotype marker CD56, activating receptors NKp46, NKp30, NKG2D, and inhibitory receptors KIR2D expression and decrease phenotype marker CD3, activating receptor NKp44, and inhibitory receptor NKG2A expression. It is also showed that the stimulation increases ovarian cancer’s NK cells cytotocicty compared to unstimulated NK

cells (45,3% from 4,82%). Therefore, the results showed that peptide stimulation affect the expression of NK cells’ phenotype and receptors also increases NK cells’ cytotoxicity."