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The performance of a molecular dynamics simulation for the plasmodium falciparum enoyl-acyl carrier-protein reductase enzyme using amber and gtx 780 and 970 double graphical processing units

Arry Yanuar, Ari Wibisono, Denny Hermawan, Alhadi Bustamam (Faculty of Engineering, Universitas Indonesia, 2018)

 Abstrak

The invention of graphical processing units (GPUs) has significantly improved the speed of long processes used in molecular dynamics (MD) to search for drug candidates to treat diseases, such as malaria. Previous work using a single GTX GPU showed considerable improvement compared to GPUs run in a cluster environment. In the current work, AMBER and dual GTX 780 and 970 GPUs were used to run an MD simulation on the Plasmodium falciparum enoyl-acyl carrier protein reductase enzyme; the results showed that performance was improved, particularly for molecules with a large number of atoms using single GPU.

 Metadata

No. Panggil : UI-IJTECH 9:1 (2018)
Entri utama-Nama orang :
Subjek :
Penerbitan : Depok: Faculty of Engineering, Universitas Indonesia, 2018
Sumber Pengatalogan : LibUI eng rda
ISSN : 20869614
Majalah/Jurnal : International Journal of Technology
Volume : Vol. 9, No. 1, January 2018: Hal. 150-158
Tipe Konten : text
Tipe Media : unmediated
Tipe Carrier : volume
Akses Elektronik : https://doi.org/10.14716/ijtech.v9i1.1186
Institusi Pemilik : Universitas Indonesia
Lokasi : Perpustakaan UI, Lantai 4 R. Koleksi Jurnal
  • Ketersediaan
  • Ulasan
No. Panggil No. Barkod Ketersediaan
UI-IJTECH 9:1 (2018) 08-23-34743795 TERSEDIA
Ulasan:
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